Uji Efektivitas Metode Isolasi DNA Genom Kopi Arabika (Coffea arabica L.) Asal Kabupaten Jayawijaya

ABSTRACT: Genetic  substance  of  DNA  has  many  functions  as  a  basic  component  of  the  organism.  DNA  can  be  obtained directly  through  the  isolation  of  DNA.  Isolation  of  genomic  DNA  Wamena  arabica  coffee  is  done  by  treating  the young leaves to get DNA extract. This reasearch is intended to provide scientific contributions in an effort to screen the  best  methods  of  DNA  isolation,  including  a  modified  extraction  of  Zheng  et  al  method  (2005),  a  modified method of Doyle and Doyle (1990), and method of George and Khan modificaation (2008) or CTAB method. All of methods  were  tested  on  Arabica  coffee  Jayawijaya  Wamena.  Testing  was  done  by  looking  at  the  difference  in quality and quantity of products in the form of genomic DNA concentration and DNA thickness, comparing with the marker DNA then electrophoresis on agarose gel. From the results of testing the effectiveness of three types of isolation methods, it was found that the method of George  and Khan (2008) or CTAB genomic DNA  produce the best quality than other methods. In terms of quantity, the criteria in the form of DNA concentrations ranging from 100 ng λ-DNA/l, λ-DNA  50  ng/l, λ-DNA  10  ng/l.  Concentration  of  genomic  DNA  bands  visible  when  the profile is visualized in gel electrophoresis with UV luminescence. This study will be a step and initial information about  the  genetic  composition  of  a  population  of  arabica  coffee  which  still  exists,  and  will  be  developed  through DNA amplification technique. 
Key words: coffee, isolation of genomic DNA, CTAB method, profile band pattern
Penulis: ARSYAM MAWARDI, MARIA L. SIMONAPENDI
Kode Jurnal: jpbiologidd160002

Artikel Terkait :